canu¶
Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences
homepage: https://github.com/marbl/canu
| version | versionsuffix | toolchain |
|---|---|---|
1.4 |
foss/2016b |
|
1.7 |
intel/2018a |
|
1.8 |
-Perl-5.28.1 |
GCCcore/8.2.0 |
1.8 |
-Perl-5.26.0 |
foss/2017b |
1.8 |
-Perl-5.28.0 |
foss/2018b |
1.8 |
-Perl-5.26.0 |
intel/2017b |
1.9 |
-Java-11 |
GCCcore/8.3.0 |
2.1.1 |
GCCcore/10.2.0 |
|
2.1.1 |
-Java-11 |
GCCcore/9.3.0 |
2.2 |
GCC/12.2.0 |
|
2.2 |
-Java-11 |
GCCcore/10.3.0 |
2.2 |
GCCcore/10.3.0 |
|
2.2 |
GCCcore/11.2.0 |
|
2.2 |
GCCcore/11.3.0 |
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