hdWGCNA

hdWGCNA is an R package for performing weighted gene co-expression network analysis (WGCNA) in high dimensional transcriptomics data such as single-cell RNA-seq or spatial transcriptomics. hdWGCNA is highly modular and can construct context-specific co-expression networks across cellular and spatial hierarchies. hdWGNCA identifies modules of highly co-expressed genes and provides context for these modules via statistical testing and biological knowledge sources. hdWGCNA uses datasets formatted as Seurat objects.

homepage: https://smorabit.github.io/hdWGCNA/

version	versionsuffix	toolchain
0.3.00	-R-4.3.2	foss/2023a

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