Mikado

Mikado is a lightweight Python3 pipeline to identify the most useful or “best” set of transcripts from multiple transcript assemblies. Our approach leverages transcript assemblies generated by multiple methods to define expressed loci, assign a representative transcript and return a set of gene models that selects against transcripts that are chimeric, fragmented or with short or disrupted CDS.

homepage: https://github.com/EI-CoreBioinformatics/mikado

version	toolchain
2.3.4	foss/2022b

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