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parasail

parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and semi-global pairwise sequence alignment algorithms.

homepage: https://github.com/jeffdaily/parasail

version toolchain
2.2 intel/2018a
2.4 foss/2018b
2.4.1 GCC/8.3.0
2.4.1 intel/2019b
2.4.2 GCC/9.3.0
2.4.2 iccifort/2020.1.217
2.4.3 GCC/10.2.0
2.4.3 GCC/10.3.0
2.5 GCC/11.2.0
2.6 GCC/11.3.0
2.6.2 GCC/12.2.0
2.6.2 GCC/12.3.0
2.6.2 GCC/13.2.0

(quick links: (all) - 0 - a - b - c - d - e - f - g - h - i - j - k - l - m - n - o - p - q - r - s - t - u - v - w - x - y - z)