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SpatialDE

SpatialDE is a method to identify genes which significantly depend on spatial coordinates in non-linear and non-parametric ways. The intended applications are spatially resolved RNA-sequencing from e.g. Spatial Transcriptomics, or in situ gene expression measurements from e.g. SeqFISH or MERFISH.

homepage: https://pypi.org/project/SpatialDE

version toolchain
1.1.3 foss/2022a

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